STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0E0MJK1Uncharacterized protein; Belongs to the RecA family. (251 aa)    
Predicted Functional Partners:
A0A0E0K182
RECA_2 domain-containing protein.
  
 0.983
A0A0E0JEH0
Tower domain-containing protein.
   
 0.970
A0A0E0LPV5
ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily.
  
 0.909
A0A0E0LY67
RECA_2 domain-containing protein.
  
 0.871
A0A0E0KXY0
RECA_2 domain-containing protein.
  
 0.864
A0A0E0KGN8
Uncharacterized protein; Belongs to the RecA family.
   
 0.860
A0A0E0JPF8
Uncharacterized protein.
  
 0.849
A0A0E0KUH0
Uncharacterized protein.
  
 0.827
A0A0E0MMM6
Uncharacterized protein; Belongs to the RecA family.
  
0.817
A0A0E0MH83
DNA repair protein RAD51 homolog; Binds to single and double-stranded DNA and exhibits DNA- dependent ATPase activity. Unwinds duplex DNA. Component of the meiotic recombination pathway. Seems to play a role in mediating chromosome homology search, chromosome pairing and synapsis at early stages and probably chromosome crossing-over at later stages in meiosis. Probably is involved in the repair of meiotic double strand breaks (DBSs) and in homologous recombination; Belongs to the RecA family. RAD51 subfamily.
  
0.816
Your Current Organism:
Oryza punctata
NCBI taxonomy Id: 4537
Other names: O. punctata, Oryza punctata Kotschy ex Steud.
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