STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0E0ML42Laccase; Lignin degradation and detoxification of lignin-derived products; Belongs to the multicopper oxidase family. (573 aa)    
Predicted Functional Partners:
A0A0E0L6P5
Plastocyanin; Participates in electron transfer between P700 and the cytochrome b6-f complex in photosystem I. Belongs to the plastocyanin family.
   
 0.660
A0A0E0L6Y7
Uncharacterized protein.
     
 0.648
A0A0E0JW52
Uncharacterized protein.
  
 
 0.609
A0A0E0JWU2
Uncharacterized protein.
  
 
 0.609
A0A0E0K8Z0
DsbD_2 domain-containing protein.
  
 
 0.609
A0A0E0K9J8
HMA domain-containing protein.
  
 
 0.609
A0A0E0KEI1
HMA domain-containing protein.
  
 
 0.609
A0A0E0KTQ8
Uncharacterized protein.
  
 
 0.609
A0A0E0L735
DsbD_2 domain-containing protein.
  
 
 0.609
A0A0E0LEF1
Uncharacterized protein.
  
 
 0.609
Your Current Organism:
Oryza punctata
NCBI taxonomy Id: 4537
Other names: O. punctata, Oryza punctata Kotschy ex Steud.
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