STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0E0MPG5Methyltranfer_dom domain-containing protein. (695 aa)    
Predicted Functional Partners:
A0A0E0L2G7
UBA domain-containing protein.
    
 0.932
A0A0E0JLA1
WD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family.
     
 0.901
A0A0E0L5Z1
Uncharacterized protein.
     
 0.873
A0A0E0JV94
WD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family.
     
 0.849
A0A0E0KL37
WD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family.
     
 0.849
A0A0E0LIX5
WD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family.
     
 0.849
A0A0E0KHH1
WD_REPEATS_REGION domain-containing protein.
     
 0.508
A0A0E0JZA5
HAUS6_N domain-containing protein.
     
 0.504
A0A0E0JY83
Peptidase_S26 domain-containing protein.
   
 
 0.498
A0A0E0KJE9
Peptidase_S26 domain-containing protein.
   
 
 0.498
Your Current Organism:
Oryza punctata
NCBI taxonomy Id: 4537
Other names: O. punctata, Oryza punctata Kotschy ex Steud.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.