STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
I1NMB2_ORYGLPeptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (246 aa)    
Predicted Functional Partners:
I1Q9X2_ORYGL
Uncharacterized protein.
    
  0.979
I1PP94_ORYGL
WD_REPEATS_REGION domain-containing protein.
   
 
 0.951
I1R4F2_ORYGL
RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires a tRNA-binding adapter protein for full tRNA acetyltransferase activity but not for 18S rRNA acetylation.
  
 
 0.921
I1Q421_ORYGL
WD_REPEATS_REGION domain-containing protein.
   
 
 0.916
I1NUV4_ORYGL
Uncharacterized protein.
   
 
 0.913
I1P5N2_ORYGL
Uncharacterized protein.
   
 
 0.912
I1PSV3_ORYGL
Uncharacterized protein.
   
 
 0.912
I1PXC4_ORYGL
WD_REPEATS_REGION domain-containing protein.
   
 
 0.904
I1PF72_ORYGL
WD_REPEATS_REGION domain-containing protein.
   
 
 0.900
I1Q950_ORYGL
WD_REPEATS_REGION domain-containing protein.
   
 
 0.899
Your Current Organism:
Oryza glaberrima
NCBI taxonomy Id: 4538
Other names: African rice, O. glaberrima, Oryza glaberrima Steud.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.