STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
I1NPQ0_ORYGLUncharacterized protein. (965 aa)    
Predicted Functional Partners:
I1QY73_ORYGL
NAC domain-containing protein.
  
 
  0.575
I1QFY7_ORYGL
DUF569 domain-containing protein.
  
 
  0.563
I1QTH7_ORYGL
Dirigent protein; Dirigent proteins impart stereoselectivity on the phenoxy radical-coupling reaction, yielding optically active lignans from two molecules of coniferyl alcohol in the biosynthesis of lignans, flavonolignans, and alkaloids and thus plays a central role in plant secondary metabolism.
  
 
  0.551
I1R176_ORYGL
AAI domain-containing protein.
  
 
  0.546
I1PQL7_ORYGL
Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs).
    
 0.537
I1NSL0_ORYGL
NAC domain-containing protein.
  
 
  0.536
I1NWZ6_ORYGL
F-box domain-containing protein.
  
     0.525
I1NQH3_ORYGL
Homeobox domain-containing protein.
  
  0.521
I1QDD2_ORYGL
VQ domain-containing protein.
  
     0.515
I1PJ31_ORYGL
Uncharacterized protein.
  
 
  0.505
Your Current Organism:
Oryza glaberrima
NCBI taxonomy Id: 4538
Other names: African rice, O. glaberrima, Oryza glaberrima Steud.
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