STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
I1NT76_ORYGLUncharacterized protein. (255 aa)    
Predicted Functional Partners:
I1Q1C5_ORYGL
Uncharacterized protein.
  
 0.995
I1NXP6_ORYGL
Glyceraldehyde-3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.
 
 0.990
I1PMF5_ORYGL
Glyceraldehyde-3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.
 
 0.990
I1QF99_ORYGL
Glyceraldehyde-3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.
 
 0.990
I1NXN0_ORYGL
Phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family.
 
 0.989
I1P765_ORYGL
Glyceraldehyde-3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.
 
 0.989
I1Q1B2_ORYGL
Glucose-6-phosphate isomerase; Belongs to the GPI family.
  
 0.989
I1Q4G7_ORYGL
Phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family.
 
 0.989
I1QJH8_ORYGL
Glucose-6-phosphate isomerase; Belongs to the GPI family.
  
 0.989
I1NSF5_ORYGL
Phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family.
 
 0.988
Your Current Organism:
Oryza glaberrima
NCBI taxonomy Id: 4538
Other names: African rice, O. glaberrima, Oryza glaberrima Steud.
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