STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
I1NUW3_ORYGLUncharacterized protein. (232 aa)    
Predicted Functional Partners:
I1QDH4_ORYGL
CASP-like protein; Belongs to the Casparian strip membrane proteins (CASP) family.
  
     0.454
I1QEM5_ORYGL
Uncharacterized protein.
  
     0.450
I1P3M1_ORYGL
Uncharacterized protein.
  
     0.443
I1QQ13_ORYGL
Uncharacterized protein.
  
     0.443
I1QSE4_ORYGL
Uncharacterized protein; Belongs to the disease resistance NB-LRR family.
  
     0.443
I1QEM6_ORYGL
Uncharacterized protein.
  
     0.434
I1R697_ORYGL
Uncharacterized protein; Belongs to the disease resistance NB-LRR family.
  
     0.433
I1P7T9_ORYGL
DUF4005 domain-containing protein.
  
     0.426
I1PVL9_ORYGL
Uncharacterized protein.
      
 0.420
I1PSW2_ORYGL
F-box domain-containing protein.
  
     0.419
Your Current Organism:
Oryza glaberrima
NCBI taxonomy Id: 4538
Other names: African rice, O. glaberrima, Oryza glaberrima Steud.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.