STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
I1NY78_ORYGLUncharacterized protein. (276 aa)    
Predicted Functional Partners:
I1QXI4_ORYGL
DsbD domain-containing protein.
  
    0.670
I1R3V4_ORYGL
DsbD domain-containing protein.
  
    0.670
I1PS51_ORYGL
Uncharacterized protein.
   
 0.627
I1P5W6_ORYGL
Uncharacterized protein.
   
 0.611
I1QIR3_ORYGL
Uncharacterized protein.
   
 0.611
I1P5X7_ORYGL
Uncharacterized protein.
  
    0.597
I1P1S0_ORYGL
Uncharacterized protein.
   
  
 0.563
I1PM88_ORYGL
Uncharacterized protein.
   
  
 0.563
I1PC83_ORYGL
Uncharacterized protein.
   
 0.546
I1NVN5_ORYGL
Uncharacterized protein.
   
 0.540
Your Current Organism:
Oryza glaberrima
NCBI taxonomy Id: 4538
Other names: African rice, O. glaberrima, Oryza glaberrima Steud.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.