STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
I1P2X6_ORYGLUncharacterized protein; Belongs to the MIP/aquaporin (TC 1.A.8) family. (289 aa)    
Predicted Functional Partners:
I1NQJ9_ORYGL
AAA domain-containing protein.
  
 0.786
I1NRR8_ORYGL
AAA domain-containing protein.
  
 0.786
KATNA1
Katanin p60 ATPase-containing subunit A1; Severs microtubules in an ATP-dependent manner. Microtubule severing may promote rapid reorganization of cellular microtubule arrays.
  
 0.768
I1NQI1_ORYGL
Uncharacterized protein.
  
 0.765
I1NXT8_ORYGL
Uncharacterized protein.
  
 0.765
I1NYE9_ORYGL
AAA domain-containing protein; Belongs to the AAA ATPase family.
  
 0.765
I1P4Y3_ORYGL
Uncharacterized protein.
  
 0.765
I1PAF8_ORYGL
AAA domain-containing protein; Belongs to the AAA ATPase family.
  
 0.765
I1PQ98_ORYGL
Uncharacterized protein.
  
 0.765
I1Q088_ORYGL
AAA domain-containing protein; Belongs to the AAA ATPase family.
  
 0.765
Your Current Organism:
Oryza glaberrima
NCBI taxonomy Id: 4538
Other names: African rice, O. glaberrima, Oryza glaberrima Steud.
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