STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
I1P4S3_ORYGLAAA domain-containing protein. (248 aa)    
Predicted Functional Partners:
I1P9C9_ORYGL
Uncharacterized protein.
   
 0.999
I1PNZ3_ORYGL
AAA domain-containing protein.
  
0.999
I1P5B1_ORYGL
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
  
 0.998
I1P9S6_ORYGL
AAA domain-containing protein.
   
 0.996
I1PG96_ORYGL
AAA domain-containing protein.
  
0.996
I1QW74_ORYGL
Uncharacterized protein.
   
 0.996
I1P9Q5_ORYGL
AAA domain-containing protein.
   
 0.995
I1PN84_ORYGL
Checkpoint protein; Belongs to the HUS1 family.
   
 0.995
I1QEQ7_ORYGL
Uncharacterized protein; Belongs to the rad9 family.
   
 0.995
I1R119_ORYGL
Replication factor C subunit 1.
   
0.995
Your Current Organism:
Oryza glaberrima
NCBI taxonomy Id: 4538
Other names: African rice, O. glaberrima, Oryza glaberrima Steud.
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