STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
I1P5Q0_ORYGLUncharacterized protein. (327 aa)    
Predicted Functional Partners:
I1NS56_ORYGL
Uncharacterized protein.
  
 0.957
I1NV76_ORYGL
ERCC4 domain-containing protein.
   
 0.939
I1NKS7_ORYGL
DUF1767 domain-containing protein.
   
 0.937
I1PLE9_ORYGL
Uncharacterized protein.
 
   
  0.926
I1Q5E2_ORYGL
Uncharacterized protein; Belongs to the PI3/PI4-kinase family.
   
 0.926
I1P1C8_ORYGL
RECA_2 domain-containing protein.
  
 0.916
I1QAS6_ORYGL
Uncharacterized protein.
  
 0.913
I1R7Z9_ORYGL
Uncharacterized protein.
  
 0.913
I1QY81_ORYGL
Uncharacterized protein.
   
 0.906
I1R4H9_ORYGL
Uncharacterized protein.
   
 0.906
Your Current Organism:
Oryza glaberrima
NCBI taxonomy Id: 4538
Other names: African rice, O. glaberrima, Oryza glaberrima Steud.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.