STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
I1P755_ORYGLFKS1_dom1 domain-containing protein. (1907 aa)    
Predicted Functional Partners:
I1Q1W4_ORYGL
Uncharacterized protein.
     
0.770
I1QA36_ORYGL
Starch synthase, chloroplastic/amyloplastic; Belongs to the glycosyltransferase 1 family. Bacterial/plant glycogen synthase subfamily.
    
 0.583
WAXY
Granule-bound starch synthase 1, chloroplastic/amyloplastic; Required for the synthesis of amylose in endosperm; Belongs to the glycosyltransferase 1 family. Bacterial/plant glycogen synthase subfamily.
    
 0.583
I1QHZ2_ORYGL
Glucose-1-phosphate adenylyltransferase; This protein plays a role in synthesis of starch. It catalyzes the synthesis of the activated glycosyl donor, ADP-glucose from Glc-1-P and ATP.
     
 0.564
I1QMR5_ORYGL
Glucose-1-phosphate adenylyltransferase; This protein plays a role in synthesis of starch. It catalyzes the synthesis of the activated glycosyl donor, ADP-glucose from Glc-1-P and ATP.
     
 0.564
I1Q1A4_ORYGL
Uncharacterized protein.
    
 0.477
I1Q1A5_ORYGL
SnAC domain-containing protein.
    
 0.477
I1NKQ1_ORYGL
NADH-cytochrome b5 reductase; Belongs to the flavoprotein pyridine nucleotide cytochrome reductase family.
   
 
 0.468
I1R087_ORYGL
Cation_ATPase_N domain-containing protein.
   
 
 0.463
I1R153_ORYGL
X8 domain-containing protein; Belongs to the glycosyl hydrolase 17 family.
  
  
  0.456
Your Current Organism:
Oryza glaberrima
NCBI taxonomy Id: 4538
Other names: African rice, O. glaberrima, Oryza glaberrima Steud.
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