STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
I1P7Y3_ORYGLRING-type domain-containing protein. (533 aa)    
Predicted Functional Partners:
I1PLB4_ORYGL
Ubiquitin carboxyl-terminal hydrolase; Recognizes and hydrolyzes the peptide bond at the C-terminal Gly of ubiquitin. Involved in the processing of poly-ubiquitin precursors as well as that of ubiquitinated proteins. Belongs to the peptidase C19 family.
    
 0.676
I1P0Q3_ORYGL
OTU domain-containing protein.
    
 0.606
I1P0R9_ORYGL
Uncharacterized protein.
    
 0.606
I1P0T8_ORYGL
Uncharacterized protein.
    
 0.606
I1PQD1_ORYGL
Uncharacterized protein.
    
 0.606
I1QLF8_ORYGL
Ubiquitin thioesterase.
    
 0.606
I1NMR0_ORYGL
Ubiquitin-like domain-containing protein.
    
  0.454
I1PSP4_ORYGL
Ubiquitin-like domain-containing protein.
    
  0.454
I1QG74_ORYGL
Ubiquitin-like domain-containing protein.
    
  0.454
I1P9N8_ORYGL
Ubiquitin-like domain-containing protein.
    
  0.436
Your Current Organism:
Oryza glaberrima
NCBI taxonomy Id: 4538
Other names: African rice, O. glaberrima, Oryza glaberrima Steud.
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