STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
I1P9V4_ORYGLGlycos_transf_1 domain-containing protein. (463 aa)    
Predicted Functional Partners:
I1QP16_ORYGL
Uncharacterized protein.
     
 0.955
I1P592_ORYGL
Uncharacterized protein.
     
 0.954
I1R249_ORYGL
Uncharacterized protein; Belongs to the glycosyl hydrolase 1 family.
     
 0.948
I1QHD9_ORYGL
Uncharacterized protein.
     
 0.898
I1PL51_ORYGL
Glycos_transf_1 domain-containing protein.
  
  
0.871
I1QXV7_ORYGL
Glycos_transf_1 domain-containing protein.
  
  
0.856
I1P119_ORYGL
Glycos_transf_1 domain-containing protein.
  
  
0.767
I1NNL5_ORYGL
Uncharacterized protein.
     
 0.591
I1QH01_ORYGL
Uncharacterized protein.
  
     0.523
I1NPT7_ORYGL
Neutral ceramidase.
      
 0.404
Your Current Organism:
Oryza glaberrima
NCBI taxonomy Id: 4538
Other names: African rice, O. glaberrima, Oryza glaberrima Steud.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.