STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
I1PA96_ORYGLPseudoU_synth_2 domain-containing protein. (314 aa)    
Predicted Functional Partners:
I1R571_ORYGL
Uncharacterized protein.
  
 
 0.864
I1NVW0_ORYGL
SpoU_methylase domain-containing protein.
  
 
 0.813
I1QZW3_ORYGL
G domain-containing protein.
   
 
 0.789
I1PZ61_ORYGL
Uncharacterized protein.
    
 
 0.772
I1NZ55_ORYGL
Uncharacterized protein.
  
   0.771
I1PXU7_ORYGL
Uncharacterized protein.
  
   0.771
I1NT59_ORYGL
Uncharacterized protein; Belongs to the bacterial ribosomal protein bL17 family.
   
   0.770
I1PWC5_ORYGL
Uncharacterized protein; Belongs to the bacterial ribosomal protein bL17 family.
   
   0.770
I1P8Q4_ORYGL
L51_S25_CI-B8 domain-containing protein.
   
   0.763
I1NLX1_ORYGL
Uncharacterized protein; Belongs to the universal ribosomal protein uL3 family.
   
 
 0.762
Your Current Organism:
Oryza glaberrima
NCBI taxonomy Id: 4538
Other names: African rice, O. glaberrima, Oryza glaberrima Steud.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.