STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
I1PK11_ORYGLUncharacterized protein. (908 aa)    
Predicted Functional Partners:
I1PSE0_ORYGL
Serine/threonine-protein phosphatase.
    
 0.754
I1P1U6_ORYGL
Uncharacterized protein.
   
 
 0.651
I1PLG0_ORYGL
Uncharacterized protein.
   
 
 0.651
I1QIV8_ORYGL
Uncharacterized protein.
   
 
 0.651
I1QF03_ORYGL
PKS_ER domain-containing protein.
      
 0.626
I1QEF6_ORYGL
Uncharacterized protein.
   
 0.596
I1NZE6_ORYGL
Uncharacterized protein.
   
0.587
I1PIA5_ORYGL
Phytochrome; Regulatory photoreceptor which exists in two forms that are reversibly interconvertible by light: the Pr form that absorbs maximally in the red region of the spectrum and the Pfr form that absorbs maximally in the far-red region.
    
 0.553
I1QJI6_ORYGL
14_3_3 domain-containing protein; Belongs to the 14-3-3 family.
    
 0.545
I1QPY4_ORYGL
Uncharacterized protein.
  
 
 0.523
Your Current Organism:
Oryza glaberrima
NCBI taxonomy Id: 4538
Other names: African rice, O. glaberrima, Oryza glaberrima Steud.
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