STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
I1PM31_ORYGLUncharacterized protein. (229 aa)    
Predicted Functional Partners:
I1Q8A8_ORYGL
Alpha-1,3-glucosyltransferase; Belongs to the ALG6/ALG8 glucosyltransferase family.
   
 
  0.593
I1P1S1_ORYGL
Ribosomal RNA-processing protein 8; Probable methyltransferase required to silence rDNA. Belongs to the methyltransferase superfamily. RRP8 family.
   
  
 0.538
I1QBE8_ORYGL
Uncharacterized protein.
  
     0.467
I1NSP0_ORYGL
Uncharacterized protein.
  
 
 0.463
I1P1Q9_ORYGL
Brix domain-containing protein.
   
  
 0.429
I1P4C3_ORYGL
Uncharacterized protein.
  
     0.424
I1QQL1_ORYGL
Uncharacterized protein.
   
    0.422
I1QFJ3_ORYGL
Uncharacterized protein.
  
     0.419
I1QQI1_ORYGL
Uncharacterized protein.
  
     0.419
I1R8Y7_ORYGL
Uncharacterized protein.
  
     0.419
Your Current Organism:
Oryza glaberrima
NCBI taxonomy Id: 4538
Other names: African rice, O. glaberrima, Oryza glaberrima Steud.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.