Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
I1NKW9_ORYGL | I1PBB9_ORYGL | I1NKW9 | I1PBB9 | CLP1_P domain-containing protein. | Nuclear/nucleolar GTPase 2; GTPase involved in pre-60S ribosomal subunit maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily. | 0.747 |
I1NKW9_ORYGL | I1PEM3_ORYGL | I1NKW9 | I1PEM3 | CLP1_P domain-containing protein. | Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family. | 0.804 |
I1NKW9_ORYGL | I1PM23_ORYGL | I1NKW9 | I1PM23 | CLP1_P domain-containing protein. | Ipi1_N domain-containing protein. | 0.979 |
I1NKW9_ORYGL | I1PMT7_ORYGL | I1NKW9 | I1PMT7 | CLP1_P domain-containing protein. | Uncharacterized protein. | 0.407 |
I1NKW9_ORYGL | I1PU75_ORYGL | I1NKW9 | I1PU75 | CLP1_P domain-containing protein. | Uncharacterized protein. | 0.983 |
I1NKW9_ORYGL | I1QA15_ORYGL | I1NKW9 | I1QA15 | CLP1_P domain-containing protein. | WD_REPEATS_REGION domain-containing protein. | 0.983 |
I1NKW9_ORYGL | I1QA93_ORYGL | I1NKW9 | I1QA93 | CLP1_P domain-containing protein. | Ribosome biogenesis protein BOP1 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat BOP1/ERB1 family. | 0.913 |
I1PBB9_ORYGL | I1NKW9_ORYGL | I1PBB9 | I1NKW9 | Nuclear/nucleolar GTPase 2; GTPase involved in pre-60S ribosomal subunit maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily. | CLP1_P domain-containing protein. | 0.747 |
I1PBB9_ORYGL | I1PEM3_ORYGL | I1PBB9 | I1PEM3 | Nuclear/nucleolar GTPase 2; GTPase involved in pre-60S ribosomal subunit maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily. | Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family. | 0.999 |
I1PBB9_ORYGL | I1PM23_ORYGL | I1PBB9 | I1PM23 | Nuclear/nucleolar GTPase 2; GTPase involved in pre-60S ribosomal subunit maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily. | Ipi1_N domain-containing protein. | 0.996 |
I1PBB9_ORYGL | I1PMT7_ORYGL | I1PBB9 | I1PMT7 | Nuclear/nucleolar GTPase 2; GTPase involved in pre-60S ribosomal subunit maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily. | Uncharacterized protein. | 0.409 |
I1PBB9_ORYGL | I1PU75_ORYGL | I1PBB9 | I1PU75 | Nuclear/nucleolar GTPase 2; GTPase involved in pre-60S ribosomal subunit maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily. | Uncharacterized protein. | 0.993 |
I1PBB9_ORYGL | I1QA15_ORYGL | I1PBB9 | I1QA15 | Nuclear/nucleolar GTPase 2; GTPase involved in pre-60S ribosomal subunit maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily. | WD_REPEATS_REGION domain-containing protein. | 0.993 |
I1PBB9_ORYGL | I1QA93_ORYGL | I1PBB9 | I1QA93 | Nuclear/nucleolar GTPase 2; GTPase involved in pre-60S ribosomal subunit maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily. | Ribosome biogenesis protein BOP1 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat BOP1/ERB1 family. | 0.995 |
I1PEM3_ORYGL | I1NKW9_ORYGL | I1PEM3 | I1NKW9 | Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family. | CLP1_P domain-containing protein. | 0.804 |
I1PEM3_ORYGL | I1PBB9_ORYGL | I1PEM3 | I1PBB9 | Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family. | Nuclear/nucleolar GTPase 2; GTPase involved in pre-60S ribosomal subunit maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily. | 0.999 |
I1PEM3_ORYGL | I1PM23_ORYGL | I1PEM3 | I1PM23 | Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family. | Ipi1_N domain-containing protein. | 0.907 |
I1PEM3_ORYGL | I1PMT7_ORYGL | I1PEM3 | I1PMT7 | Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family. | Uncharacterized protein. | 0.477 |
I1PEM3_ORYGL | I1PU75_ORYGL | I1PEM3 | I1PU75 | Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family. | Uncharacterized protein. | 0.976 |
I1PEM3_ORYGL | I1QA15_ORYGL | I1PEM3 | I1QA15 | Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family. | WD_REPEATS_REGION domain-containing protein. | 0.976 |
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