STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
I1PMZ9_ORYGLUncharacterized protein; Belongs to the glycosyl hydrolase 1 family. (516 aa)    
Predicted Functional Partners:
I1NNU8_ORYGL
Cupin_2 domain-containing protein.
  
 
 0.796
I1NVK0_ORYGL
Uncharacterized protein; Belongs to the glycosyl hydrolase 32 family.
   
 
 0.793
I1P4U3_ORYGL
Endoglucanase.
     
 0.793
I1PNE0_ORYGL
Uncharacterized protein; Belongs to the glycosyl hydrolase 32 family.
   
 
 0.793
I1NWE1_ORYGL
Uncharacterized protein; Belongs to the glycosyl hydrolase 32 family.
   
 
 0.792
I1PLL0_ORYGL
Endoglucanase.
     
 0.790
I1Q6Y4_ORYGL
Uncharacterized protein; Belongs to the glycosyl hydrolase 1 family.
  
  
 
0.790
I1NMJ5_ORYGL
Endoglucanase.
     
 0.787
I1PI33_ORYGL
Endoglucanase.
     
 0.786
I1QQM5_ORYGL
Endoglucanase.
     
 0.786
Your Current Organism:
Oryza glaberrima
NCBI taxonomy Id: 4538
Other names: African rice, O. glaberrima, Oryza glaberrima Steud.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.