STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
I1PPQ3_ORYGLUncharacterized protein. (136 aa)    
Predicted Functional Partners:
I1NPT0_ORYGL
Uncharacterized protein.
   
 0.929
I1PZ75_ORYGL
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
    
 0.896
I1PLV6_ORYGL
Uncharacterized protein.
  
  
 
0.877
I1PDC1_ORYGL
Uncharacterized protein.
  
 
  0.562
I1PEY3_ORYGL
H15 domain-containing protein.
  
     0.539
I1PL44_ORYGL
AAI domain-containing protein.
  
     0.533
I1Q886_ORYGL
VQ domain-containing protein.
  
     0.531
I1PVK5_ORYGL
LRRNT_2 domain-containing protein.
    
 0.526
I1QQ52_ORYGL
Uncharacterized protein.
  
     0.520
I1NQM5_ORYGL
Uncharacterized protein.
  
     0.516
Your Current Organism:
Oryza glaberrima
NCBI taxonomy Id: 4538
Other names: African rice, O. glaberrima, Oryza glaberrima Steud.
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.