I1PSD4_ORYGL protein (Oryza glaberrima) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

I1PSD4_ORYGL

Uncharacterized protein. (602 aa)

Predicted Functional Partners:

I1NL33_ORYGL

0.477

I1PYD9_ORYGL

0.440

I1NRL4_ORYGL

0.416

Your Current Organism:

Oryza glaberrima

NCBI taxonomy Id: 4538
Other names: African rice, O. glaberrima, Oryza glaberrima Steud.

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
I1NL33_ORYGL	I1PSD4_ORYGL	I1NL33	I1PSD4	Uncharacterized protein.	Uncharacterized protein.	0.477
I1NRL4_ORYGL	I1PSD4_ORYGL	I1NRL4	I1PSD4	Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).	Uncharacterized protein.	0.416
I1PSD4_ORYGL	I1NL33_ORYGL	I1PSD4	I1NL33	Uncharacterized protein.	Uncharacterized protein.	0.477
I1PSD4_ORYGL	I1NRL4_ORYGL	I1PSD4	I1NRL4	Uncharacterized protein.	Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).	0.416
I1PSD4_ORYGL	I1PYD9_ORYGL	I1PSD4	I1PYD9	Uncharacterized protein.	Uncharacterized protein.	0.440
I1PYD9_ORYGL	I1PSD4_ORYGL	I1PYD9	I1PSD4	Uncharacterized protein.	Uncharacterized protein.	0.440