STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
I1Q1N5_ORYGLUncharacterized protein; Belongs to the disease resistance NB-LRR family. (690 aa)    
Predicted Functional Partners:
I1PLN2_ORYGL
Uncharacterized protein.
  
 
   0.521
I1NY45_ORYGL
Uncharacterized protein.
  
    0.514
I1PZP8_ORYGL
Uncharacterized protein.
  
     0.513
I1R1V5_ORYGL
Uncharacterized protein.
  
     0.511
I1QYF2_ORYGL
F-box domain-containing protein.
  
 
   0.489
I1QQI1_ORYGL
Uncharacterized protein.
  
     0.487
I1PFJ0_ORYGL
Uncharacterized protein.
  
     0.486
I1PL00_ORYGL
Uncharacterized protein.
  
 
   0.473
I1PT70_ORYGL
Uncharacterized protein.
  
     0.473
I1NV17_ORYGL
Uncharacterized protein.
  
 
   0.467
Your Current Organism:
Oryza glaberrima
NCBI taxonomy Id: 4538
Other names: African rice, O. glaberrima, Oryza glaberrima Steud.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.