STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
I1Q2W4_ORYGLUncharacterized protein. (351 aa)    
Predicted Functional Partners:
I1QQX0_ORYGL
Uncharacterized protein.
    
 
 0.755
I1Q450_ORYGL
WD_REPEATS_REGION domain-containing protein.
    
 0.535
I1PM29_ORYGL
Telo_bind domain-containing protein.
    
 0.520
I1Q566_ORYGL
Uncharacterized protein.
    
 0.511
I1QCN8_ORYGL
Uncharacterized protein; Belongs to the PI3/PI4-kinase family.
    
  0.509
I1QEF6_ORYGL
Uncharacterized protein.
    
 0.499
I1NQR0_ORYGL
DNA ligase.
    
 0.488
I1PEE7_ORYGL
WD_REPEATS_REGION domain-containing protein.
    
 0.468
I1QPY4_ORYGL
Uncharacterized protein.
    
 0.460
I1NNI4_ORYGL
TAF domain-containing protein.
    
 0.458
Your Current Organism:
Oryza glaberrima
NCBI taxonomy Id: 4538
Other names: African rice, O. glaberrima, Oryza glaberrima Steud.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.