Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
I1NPB2_ORYGL | I1P0P1_ORYGL | I1NPB2 | I1P0P1 | Helicase ATP-binding domain-containing protein. | DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family. | 0.740 |
I1NPB2_ORYGL | I1PFZ7_ORYGL | I1NPB2 | I1PFZ7 | Helicase ATP-binding domain-containing protein. | Uncharacterized protein. | 0.575 |
I1NPB2_ORYGL | I1PPB3_ORYGL | I1NPB2 | I1PPB3 | Helicase ATP-binding domain-containing protein. | FeS_assembly_P domain-containing protein. | 0.585 |
I1NPB2_ORYGL | I1PR49_ORYGL | I1NPB2 | I1PR49 | Helicase ATP-binding domain-containing protein. | Protein kinase domain-containing protein. | 0.667 |
I1NPB2_ORYGL | I1Q8H9_ORYGL | I1NPB2 | I1Q8H9 | Helicase ATP-binding domain-containing protein. | MMS19_N domain-containing protein. | 0.902 |
I1NPB2_ORYGL | I1Q9H2_ORYGL | I1NPB2 | I1Q9H2 | Helicase ATP-binding domain-containing protein. | Probable cytosolic iron-sulfur protein assembly protein CIAO1 homolog; Essential component of the cytosolic iron-sulfur (Fe/S) protein assembly machinery. Required for the maturation of extramitochondrial Fe/S proteins. | 0.600 |
I1P0P1_ORYGL | I1NPB2_ORYGL | I1P0P1 | I1NPB2 | DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family. | Helicase ATP-binding domain-containing protein. | 0.740 |
I1P0P1_ORYGL | I1PFZ7_ORYGL | I1P0P1 | I1PFZ7 | DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family. | Uncharacterized protein. | 0.412 |
I1P0P1_ORYGL | I1PPB3_ORYGL | I1P0P1 | I1PPB3 | DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family. | FeS_assembly_P domain-containing protein. | 0.412 |
I1P0P1_ORYGL | I1PR49_ORYGL | I1P0P1 | I1PR49 | DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family. | Protein kinase domain-containing protein. | 0.991 |
I1P0P1_ORYGL | I1PSE1_ORYGL | I1P0P1 | I1PSE1 | DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family. | Helicase ATP-binding domain-containing protein. | 0.760 |
I1P0P1_ORYGL | I1PTE4_ORYGL | I1P0P1 | I1PTE4 | DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family. | Helicase ATP-binding domain-containing protein. | 0.733 |
I1P0P1_ORYGL | I1PTE5_ORYGL | I1P0P1 | I1PTE5 | DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family. | Uncharacterized protein. | 0.733 |
I1P0P1_ORYGL | I1Q8H9_ORYGL | I1P0P1 | I1Q8H9 | DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family. | MMS19_N domain-containing protein. | 0.877 |
I1P0P1_ORYGL | I1Q9H2_ORYGL | I1P0P1 | I1Q9H2 | DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family. | Probable cytosolic iron-sulfur protein assembly protein CIAO1 homolog; Essential component of the cytosolic iron-sulfur (Fe/S) protein assembly machinery. Required for the maturation of extramitochondrial Fe/S proteins. | 0.587 |
I1P0P1_ORYGL | I1QR30_ORYGL | I1P0P1 | I1QR30 | DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family. | Helicase ATP-binding domain-containing protein. | 0.740 |
I1PFZ7_ORYGL | I1NPB2_ORYGL | I1PFZ7 | I1NPB2 | Uncharacterized protein. | Helicase ATP-binding domain-containing protein. | 0.575 |
I1PFZ7_ORYGL | I1P0P1_ORYGL | I1PFZ7 | I1P0P1 | Uncharacterized protein. | DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family. | 0.412 |
I1PFZ7_ORYGL | I1PR49_ORYGL | I1PFZ7 | I1PR49 | Uncharacterized protein. | Protein kinase domain-containing protein. | 0.412 |
I1PFZ7_ORYGL | I1PSE1_ORYGL | I1PFZ7 | I1PSE1 | Uncharacterized protein. | Helicase ATP-binding domain-containing protein. | 0.575 |
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