STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
I1Q8H9_ORYGLMMS19_N domain-containing protein. (675 aa)    
Predicted Functional Partners:
I1Q9H2_ORYGL
Probable cytosolic iron-sulfur protein assembly protein CIAO1 homolog; Essential component of the cytosolic iron-sulfur (Fe/S) protein assembly machinery. Required for the maturation of extramitochondrial Fe/S proteins.
    
 0.997
I1PPB3_ORYGL
FeS_assembly_P domain-containing protein.
    
 0.995
I1PSE1_ORYGL
Helicase ATP-binding domain-containing protein.
    
 0.991
I1PFZ7_ORYGL
Uncharacterized protein.
    
 0.988
I1NPB2_ORYGL
Helicase ATP-binding domain-containing protein.
    
 0.902
I1QR30_ORYGL
Helicase ATP-binding domain-containing protein.
    
 0.902
I1PTE4_ORYGL
Helicase ATP-binding domain-containing protein.
    
 0.896
I1PTE5_ORYGL
Uncharacterized protein.
    
 0.896
I1PR49_ORYGL
Protein kinase domain-containing protein.
    
 0.880
I1P0P1_ORYGL
DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family.
    
 0.877
Your Current Organism:
Oryza glaberrima
NCBI taxonomy Id: 4538
Other names: African rice, O. glaberrima, Oryza glaberrima Steud.
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