STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
I1QI41_ORYGLUncharacterized protein. (883 aa)    
Predicted Functional Partners:
I1QKG4_ORYGL
Uncharacterized protein.
   
 
 0.951
I1PCI9_ORYGL
Pyruvate, phosphate dikinase; Belongs to the PEP-utilizing enzyme family.
     
 0.949
I1PVJ3_ORYGL
Pyruvate, phosphate dikinase; Belongs to the PEP-utilizing enzyme family.
     
 0.949
I1NRT6_ORYGL
Aspartate aminotransferase.
  
 
 0.938
I1P9L4_ORYGL
Uncharacterized protein.
     
 0.937
I1QT90_ORYGL
Uncharacterized protein.
     
 0.937
I1PMF9_ORYGL
Malate synthase; Belongs to the malate synthase family.
     
 0.928
I1NYS4_ORYGL
Citrate synthase.
     
 0.921
I1NY63_ORYGL
Citrate synthase; Belongs to the citrate synthase family.
     
 0.909
I1Q6L7_ORYGL
Formate dehydrogenase, mitochondrial; Catalyzes the NAD(+)-dependent oxidation of formate to carbon dioxide. Involved in the cell stress response; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. FDH subfamily.
    
 0.906
Your Current Organism:
Oryza glaberrima
NCBI taxonomy Id: 4538
Other names: African rice, O. glaberrima, Oryza glaberrima Steud.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.