Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
I1NWB3_ORYGL | I1PAG1_ORYGL | I1NWB3 | I1PAG1 | Small nuclear ribonucleoprotein Sm D3; Core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. | Uncharacterized protein. | 0.975 |
I1NWB3_ORYGL | I1PAX7_ORYGL | I1NWB3 | I1PAX7 | Small nuclear ribonucleoprotein Sm D3; Core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. | Uncharacterized protein. | 0.975 |
I1NWB3_ORYGL | I1Q8C3_ORYGL | I1NWB3 | I1Q8C3 | Small nuclear ribonucleoprotein Sm D3; Core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. | Small nuclear ribonucleoprotein-associated protein. | 0.996 |
I1NWB3_ORYGL | I1QJ38_ORYGL | I1NWB3 | I1QJ38 | Small nuclear ribonucleoprotein Sm D3; Core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. | Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. | 0.438 |
I1P9C0_ORYGL | I1PAG1_ORYGL | I1P9C0 | I1PAG1 | Small nuclear ribonucleoprotein Sm D3; Core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. | Uncharacterized protein. | 0.975 |
I1P9C0_ORYGL | I1PAX7_ORYGL | I1P9C0 | I1PAX7 | Small nuclear ribonucleoprotein Sm D3; Core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. | Uncharacterized protein. | 0.975 |
I1P9C0_ORYGL | I1Q8C3_ORYGL | I1P9C0 | I1Q8C3 | Small nuclear ribonucleoprotein Sm D3; Core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. | Small nuclear ribonucleoprotein-associated protein. | 0.996 |
I1P9C0_ORYGL | I1QJ38_ORYGL | I1P9C0 | I1QJ38 | Small nuclear ribonucleoprotein Sm D3; Core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. | Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. | 0.438 |
I1PAG1_ORYGL | I1NWB3_ORYGL | I1PAG1 | I1NWB3 | Uncharacterized protein. | Small nuclear ribonucleoprotein Sm D3; Core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. | 0.975 |
I1PAG1_ORYGL | I1P9C0_ORYGL | I1PAG1 | I1P9C0 | Uncharacterized protein. | Small nuclear ribonucleoprotein Sm D3; Core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. | 0.975 |
I1PAG1_ORYGL | I1Q8C3_ORYGL | I1PAG1 | I1Q8C3 | Uncharacterized protein. | Small nuclear ribonucleoprotein-associated protein. | 0.992 |
I1PAG1_ORYGL | I1QJ38_ORYGL | I1PAG1 | I1QJ38 | Uncharacterized protein. | Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. | 0.451 |
I1PAX7_ORYGL | I1NWB3_ORYGL | I1PAX7 | I1NWB3 | Uncharacterized protein. | Small nuclear ribonucleoprotein Sm D3; Core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. | 0.975 |
I1PAX7_ORYGL | I1P9C0_ORYGL | I1PAX7 | I1P9C0 | Uncharacterized protein. | Small nuclear ribonucleoprotein Sm D3; Core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. | 0.975 |
I1PAX7_ORYGL | I1Q8C3_ORYGL | I1PAX7 | I1Q8C3 | Uncharacterized protein. | Small nuclear ribonucleoprotein-associated protein. | 0.992 |
I1PAX7_ORYGL | I1QJ38_ORYGL | I1PAX7 | I1QJ38 | Uncharacterized protein. | Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. | 0.451 |
I1PJG5_ORYGL | I1PVB3_ORYGL | I1PJG5 | I1PVB3 | Uncharacterized protein. | Uncharacterized protein. | 0.437 |
I1PJG5_ORYGL | I1QEF6_ORYGL | I1PJG5 | I1QEF6 | Uncharacterized protein. | Uncharacterized protein. | 0.749 |
I1PJG5_ORYGL | I1QJ38_ORYGL | I1PJG5 | I1QJ38 | Uncharacterized protein. | Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. | 0.450 |
I1PVB3_ORYGL | I1PJG5_ORYGL | I1PVB3 | I1PJG5 | Uncharacterized protein. | Uncharacterized protein. | 0.437 |
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