STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
I1QQ41_ORYGLER membrane protein complex subunit 3. (251 aa)    
Predicted Functional Partners:
I1NWU8_ORYGL
TPR_REGION domain-containing protein.
   
 
 0.992
I1NQQ3_ORYGL
Uncharacterized protein.
   
 
 0.989
I1PTI8_ORYGL
EMC1_C domain-containing protein.
    
 
 0.989
I1Q417_ORYGL
DUF2012 domain-containing protein.
   
 
 0.989
I1R7A3_ORYGL
Uncharacterized protein.
   
 
 0.987
I1QZ61_ORYGL
Uncharacterized protein.
    
 
 0.984
I1PJQ6_ORYGL
Uncharacterized protein.
    
 
 0.980
I1PI94_ORYGL
Calcium load-activated calcium channel; Calcium-selective channel required to prevent calcium stores from overfilling.
   
 
 0.695
I1NKT6_ORYGL
t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.
     
 0.656
I1PHG3_ORYGL
Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.
   
 
 0.591
Your Current Organism:
Oryza glaberrima
NCBI taxonomy Id: 4538
Other names: African rice, O. glaberrima, Oryza glaberrima Steud.
Server load: low (12%) [HD]