STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
I1QR58_ORYGLUncharacterized protein. (740 aa)    
Predicted Functional Partners:
I1NQM8_ORYGL
Uncharacterized protein.
   
 
 0.774
I1PXL6_ORYGL
Uncharacterized protein.
   
 
 0.774
I1PQW0_ORYGL
DUF4101 domain-containing protein.
    
 
 0.672
I1PQM5_ORYGL
Uncharacterized protein.
   
 0.663
I1NNV3_ORYGL
Uncharacterized protein.
    
 
 0.652
I1NR14_ORYGL
MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family.
    
 
 0.652
I1P670_ORYGL
DUF1767 domain-containing protein.
    
 
 0.652
I1PKP6_ORYGL
DUF1767 domain-containing protein.
    
 
 0.652
I1PXK2_ORYGL
MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family.
    
 
 0.652
I1QC96_ORYGL
MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family.
    
 
 0.652
Your Current Organism:
Oryza glaberrima
NCBI taxonomy Id: 4538
Other names: African rice, O. glaberrima, Oryza glaberrima Steud.
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