STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
I1QW38_ORYGLUncharacterized protein. (196 aa)    
Predicted Functional Partners:
I1P8Y2_ORYGL
Uncharacterized protein.
  
     0.528
I1QKQ7_ORYGL
Uncharacterized protein.
  
     0.519
I1P9W7_ORYGL
Uncharacterized protein.
  
     0.479
I1P6C2_ORYGL
Uncharacterized protein.
  
     0.459
I1QVX3_ORYGL
Uncharacterized protein.
  
     0.457
I1P0M0_ORYGL
AP2/ERF domain-containing protein.
  
     0.455
I1P717_ORYGL
Uncharacterized protein.
  
     0.453
I1P277_ORYGL
Uncharacterized protein.
  
     0.446
I1PKT1_ORYGL
Uncharacterized protein.
  
     0.446
I1NLH5_ORYGL
OVATE domain-containing protein.
  
     0.444
Your Current Organism:
Oryza glaberrima
NCBI taxonomy Id: 4538
Other names: African rice, O. glaberrima, Oryza glaberrima Steud.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.