STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
I1QWE0_ORYGLFAD_binding_3 domain-containing protein. (85 aa)    
Predicted Functional Partners:
I1P4P3_ORYGL
Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.
   
 0.819
I1QJE1_ORYGL
Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.
   
 0.819
I1QRJ1_ORYGL
Uncharacterized protein.
   
 0.819
I1QRN2_ORYGL
Uncharacterized protein.
   
 0.819
I1QTE7_ORYGL
FAD-binding FR-type domain-containing protein.
   
 0.819
I1PZ90_ORYGL
Mg-por_mtran_C domain-containing protein.
   
 0.785
COQ3
Ubiquinone biosynthesis O-methyltransferase, mitochondrial; O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway; Belongs to the class I-like SAM-binding methyltransferase superfamily. UbiG/COQ3 family.
   
 0.785
I1PZN5_ORYGL
Methyltransf_25 domain-containing protein.
   
 0.785
I1NY84_ORYGL
Fumarylacetoacetase.
  
 
 0.750
I1PBX6_ORYGL
Uncharacterized protein.
  
 
 0.746
Your Current Organism:
Oryza glaberrima
NCBI taxonomy Id: 4538
Other names: African rice, O. glaberrima, Oryza glaberrima Steud.
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