STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
I1R0W2_ORYGLUncharacterized protein. (204 aa)    
Predicted Functional Partners:
I1PF37_ORYGL
Uncharacterized protein.
      
 0.485
I1R5L8_ORYGL
Uncharacterized protein.
  
     0.483
I1PUM7_ORYGL
PX domain-containing protein.
  
     0.477
I1PFG6_ORYGL
Uncharacterized protein.
  
     0.464
I1QJY2_ORYGL
PsbP domain-containing protein.
  
     0.461
I1P760_ORYGL
Uncharacterized protein.
  
     0.443
I1QG13_ORYGL
Uncharacterized protein.
      
 0.428
I1NJH2_ORYGL
Uncharacterized protein.
  
     0.424
I1R1Z9_ORYGL
Uncharacterized protein.
  
     0.420
I1R3D8_ORYGL
Uncharacterized protein.
  
     0.418
Your Current Organism:
Oryza glaberrima
NCBI taxonomy Id: 4538
Other names: African rice, O. glaberrima, Oryza glaberrima Steud.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.