STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
I1R3L0_ORYGLFHA domain-containing protein. (282 aa)    
Predicted Functional Partners:
I1NV76_ORYGL
ERCC4 domain-containing protein.
    
  0.473
I1QY81_ORYGL
Uncharacterized protein.
    
 0.439
I1R4H9_ORYGL
Uncharacterized protein.
    
 0.439
I1P5T4_ORYGL
RPA_C domain-containing protein.
    
 0.438
I1Q4T0_ORYGL
RPA_C domain-containing protein.
    
 0.438
I1PE79_ORYGL
dUTPase domain-containing protein.
    
  0.421
I1PUS5_ORYGL
Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.
    
  0.421
I1NQR0_ORYGL
DNA ligase.
    
  0.419
I1PF14_ORYGL
Uncharacterized protein.
    
  0.400
Your Current Organism:
Oryza glaberrima
NCBI taxonomy Id: 4538
Other names: African rice, O. glaberrima, Oryza glaberrima Steud.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.