I1R4B5_ORYGL protein (Oryza glaberrima) - STRING interaction network

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Predicted Interactions

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Score

I1R4B5_ORYGL

Uncharacterized protein. (994 aa)

Predicted Functional Partners:

I1P259_ORYGL

0.639

I1NZ82_ORYGL

0.623

I1PB96_ORYGL

0.574

I1QET0_ORYGL

0.574

I1R7P7_ORYGL

0.565

I1NWK9_ORYGL

0.564

I1QLW3_ORYGL

0.560

I1Q8F3_ORYGL

0.543

I1P5S0_ORYGL

0.515

I1QYC7_ORYGL

0.508

Your Current Organism:

Oryza glaberrima

NCBI taxonomy Id: 4538
Other names: African rice, O. glaberrima, Oryza glaberrima Steud.

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
I1NWK9_ORYGL	I1P259_ORYGL	I1NWK9	I1P259	RPOL4c domain-containing protein.	Nuclear cap-binding protein subunit 2.	0.817
I1NWK9_ORYGL	I1Q8F3_ORYGL	I1NWK9	I1Q8F3	RPOL4c domain-containing protein.	RNA_pol_L_2 domain-containing protein.	0.999
I1NWK9_ORYGL	I1QLW3_ORYGL	I1NWK9	I1QLW3	RPOL4c domain-containing protein.	RPOLD domain-containing protein.	0.999
I1NWK9_ORYGL	I1QYC7_ORYGL	I1NWK9	I1QYC7	RPOL4c domain-containing protein.	Uncharacterized protein.	0.995
I1NWK9_ORYGL	I1R4B5_ORYGL	I1NWK9	I1R4B5	RPOL4c domain-containing protein.	Uncharacterized protein.	0.564
I1NWK9_ORYGL	I1R7P7_ORYGL	I1NWK9	I1R7P7	RPOL4c domain-containing protein.	Uncharacterized protein.	0.927
I1NZ82_ORYGL	I1P259_ORYGL	I1NZ82	I1P259	U1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region.	Nuclear cap-binding protein subunit 2.	0.975
I1NZ82_ORYGL	I1P5S0_ORYGL	I1NZ82	I1P5S0	U1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region.	PSP domain-containing protein.	0.993
I1NZ82_ORYGL	I1PB96_ORYGL	I1NZ82	I1PB96	U1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region.	MIF4G domain-containing protein.	0.957
I1NZ82_ORYGL	I1QET0_ORYGL	I1NZ82	I1QET0	U1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region.	MIF4G domain-containing protein.	0.957
I1NZ82_ORYGL	I1R4B5_ORYGL	I1NZ82	I1R4B5	U1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region.	Uncharacterized protein.	0.623
I1P259_ORYGL	I1NWK9_ORYGL	I1P259	I1NWK9	Nuclear cap-binding protein subunit 2.	RPOL4c domain-containing protein.	0.817
I1P259_ORYGL	I1NZ82_ORYGL	I1P259	I1NZ82	Nuclear cap-binding protein subunit 2.	U1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region.	0.975
I1P259_ORYGL	I1P5S0_ORYGL	I1P259	I1P5S0	Nuclear cap-binding protein subunit 2.	PSP domain-containing protein.	0.980
I1P259_ORYGL	I1PB96_ORYGL	I1P259	I1PB96	Nuclear cap-binding protein subunit 2.	MIF4G domain-containing protein.	0.998
I1P259_ORYGL	I1Q8F3_ORYGL	I1P259	I1Q8F3	Nuclear cap-binding protein subunit 2.	RNA_pol_L_2 domain-containing protein.	0.799
I1P259_ORYGL	I1QET0_ORYGL	I1P259	I1QET0	Nuclear cap-binding protein subunit 2.	MIF4G domain-containing protein.	0.998
I1P259_ORYGL	I1QLW3_ORYGL	I1P259	I1QLW3	Nuclear cap-binding protein subunit 2.	RPOLD domain-containing protein.	0.927
I1P259_ORYGL	I1QYC7_ORYGL	I1P259	I1QYC7	Nuclear cap-binding protein subunit 2.	Uncharacterized protein.	0.744
I1P259_ORYGL	I1R4B5_ORYGL	I1P259	I1R4B5	Nuclear cap-binding protein subunit 2.	Uncharacterized protein.	0.639