STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
I1R876_ORYGLPurple acid phosphatase. (462 aa)    
Predicted Functional Partners:
I1NRS3_ORYGL
Uncharacterized protein.
  
 
 0.929
I1QTB2_ORYGL
Flavokinase domain-containing protein.
  
 
 0.873
I1QV80_ORYGL
Flavokinase domain-containing protein.
  
 
 0.873
I1PZE8_ORYGL
Nudix hydrolase domain-containing protein.
    
  0.649
I1QR42_ORYGL
Nudix hydrolase domain-containing protein.
    
  0.649
I1PLG5_ORYGL
Uncharacterized protein.
    
  0.627
I1PV88_ORYGL
Uncharacterized protein.
    
  0.627
I1QNM5_ORYGL
Uncharacterized protein.
    
  0.627
I1QYC1_ORYGL
Uncharacterized protein.
    
  0.627
I1QKC8_ORYGL
LMWPc domain-containing protein.
    
 0.549
Your Current Organism:
Oryza glaberrima
NCBI taxonomy Id: 4538
Other names: African rice, O. glaberrima, Oryza glaberrima Steud.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.