STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lisr_0214Polysaccharide deacetylase. (291 aa)    
Predicted Functional Partners:
Lisr_0215
GNAT family acetyltransferase.
 
     0.868
Lisr_0216
Hypothetical protein.
       0.530
Lisr_2314
Hypothetical protein.
  
  
 0.503
Lisr_0156
Glycosyl transferase, family 2.
  
  
 0.476
Lisr_0578
Glycosyltransferase, family 2.
  
  
 0.476
Lisr_0664
Glycosyltransferase, family 2.
  
  
 0.476
Lisr_2780
Drug efflux system protein MdtG.
  
     0.459
Lisr_0213
Transmembrane protein.
       0.424
cycA
Cytochrome c.
  
     0.421
Your Current Organism:
Legionella israelensis
NCBI taxonomy Id: 454
Other names: ATCC 43119, CCUG 31115, CIP 103879, DSM 19235, JCM 7560, L. israelensis, NCTC 12010, strain Bercovier 4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.