Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Lisr_0359 | Lisr_0853 | Lisr_0359 | Lisr_0853 | Hypothetical protein. | IcmJ protein. | 0.453 |
Lisr_0359 | Lisr_2084 | Lisr_0359 | Lisr_2084 | Hypothetical protein. | Secreted protein. | 0.400 |
Lisr_0359 | Lisr_2307 | Lisr_0359 | Lisr_2307 | Hypothetical protein. | Hypothetical protein. | 0.400 |
Lisr_0359 | Lisr_2693 | Lisr_0359 | Lisr_2693 | Hypothetical protein. | DotA. | 0.409 |
Lisr_0359 | enhA_1 | Lisr_0359 | Lisr_0923 | Hypothetical protein. | Enhanced entry protein EnhA. | 0.412 |
Lisr_0359 | enhA_2 | Lisr_0359 | Lisr_1669 | Hypothetical protein. | Enhanced entry protein EnhA. | 0.521 |
Lisr_0359 | enhA_3 | Lisr_0359 | Lisr_1766 | Hypothetical protein. | Enhanced entry protein EnhA. | 0.463 |
Lisr_0359 | enhA_5 | Lisr_0359 | Lisr_2438 | Hypothetical protein. | Enhanced entry protein EnhA. | 0.508 |
Lisr_0853 | Lisr_0359 | Lisr_0853 | Lisr_0359 | IcmJ protein. | Hypothetical protein. | 0.453 |
Lisr_0853 | Lisr_2084 | Lisr_0853 | Lisr_2084 | IcmJ protein. | Secreted protein. | 0.503 |
Lisr_0853 | Lisr_2307 | Lisr_0853 | Lisr_2307 | IcmJ protein. | Hypothetical protein. | 0.622 |
Lisr_0853 | Lisr_2693 | Lisr_0853 | Lisr_2693 | IcmJ protein. | DotA. | 0.784 |
Lisr_0853 | enhA_1 | Lisr_0853 | Lisr_0923 | IcmJ protein. | Enhanced entry protein EnhA. | 0.774 |
Lisr_0853 | enhA_2 | Lisr_0853 | Lisr_1669 | IcmJ protein. | Enhanced entry protein EnhA. | 0.774 |
Lisr_0853 | enhA_3 | Lisr_0853 | Lisr_1766 | IcmJ protein. | Enhanced entry protein EnhA. | 0.774 |
Lisr_0853 | enhA_5 | Lisr_0853 | Lisr_2438 | IcmJ protein. | Enhanced entry protein EnhA. | 0.772 |
Lisr_2084 | Lisr_0359 | Lisr_2084 | Lisr_0359 | Secreted protein. | Hypothetical protein. | 0.400 |
Lisr_2084 | Lisr_0853 | Lisr_2084 | Lisr_0853 | Secreted protein. | IcmJ protein. | 0.503 |
Lisr_2084 | Lisr_2307 | Lisr_2084 | Lisr_2307 | Secreted protein. | Hypothetical protein. | 0.712 |
Lisr_2084 | Lisr_2693 | Lisr_2084 | Lisr_2693 | Secreted protein. | DotA. | 0.661 |
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