STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lvrA_1Protein LvrA. (296 aa)    
Predicted Functional Partners:
Lisr_0484
Phage repressor.
 
     0.864
Lisr_1222
Putative membrane protein YdgA-like protein.
  
     0.769
Lisr_0857
Protein IcmE (DotG).
 
    0.767
Lisr_0851
IcmF.
  
     0.766
Lisr_0110
Putative helicase/relaxase.
  
     0.765
Lisr_2603
Phage repressor.
  
     0.758
Lisr_2693
DotA.
  
     0.756
Lisr_0819
General secretion pathway protein L; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins.
  
     0.753
Lisr_1282
Protein-tyrosine phosphatase.
  
     0.736
Lisr_1579
Cofactor-independent phosphoglycerate mutase.
  
     0.728
Your Current Organism:
Legionella israelensis
NCBI taxonomy Id: 454
Other names: ATCC 43119, CCUG 31115, CIP 103879, DSM 19235, JCM 7560, L. israelensis, NCTC 12010, strain Bercovier 4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.