Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
Lisr_0660 | Lisr_0661 | Bacteriophage-like DNA polymerase. | Acetyltransferase (GNAT) family protein. | 0.513 |
Lisr_0660 | Lisr_0662 | Bacteriophage-like DNA polymerase. | Hypothetical protein. | 0.441 |
Lisr_0660 | Lisr_0663 | Bacteriophage-like DNA polymerase. | Coiled-coil protein. | 0.441 |
Lisr_0660 | Lisr_0664 | Bacteriophage-like DNA polymerase. | Glycosyltransferase, family 2. | 0.434 |
Lisr_0660 | Lisr_0665 | Bacteriophage-like DNA polymerase. | Hypothetical protein. | 0.423 |
Lisr_0661 | Lisr_0660 | Acetyltransferase (GNAT) family protein. | Bacteriophage-like DNA polymerase. | 0.513 |
Lisr_0661 | Lisr_0662 | Acetyltransferase (GNAT) family protein. | Hypothetical protein. | 0.651 |
Lisr_0661 | Lisr_0663 | Acetyltransferase (GNAT) family protein. | Coiled-coil protein. | 0.651 |
Lisr_0661 | Lisr_0664 | Acetyltransferase (GNAT) family protein. | Glycosyltransferase, family 2. | 0.622 |
Lisr_0661 | Lisr_0665 | Acetyltransferase (GNAT) family protein. | Hypothetical protein. | 0.622 |
Lisr_0661 | Lisr_0666 | Acetyltransferase (GNAT) family protein. | VirK protein. | 0.419 |
Lisr_0662 | Lisr_0660 | Hypothetical protein. | Bacteriophage-like DNA polymerase. | 0.441 |
Lisr_0662 | Lisr_0661 | Hypothetical protein. | Acetyltransferase (GNAT) family protein. | 0.651 |
Lisr_0662 | Lisr_0663 | Hypothetical protein. | Coiled-coil protein. | 0.773 |
Lisr_0662 | Lisr_0664 | Hypothetical protein. | Glycosyltransferase, family 2. | 0.737 |
Lisr_0662 | Lisr_0665 | Hypothetical protein. | Hypothetical protein. | 0.737 |
Lisr_0662 | Lisr_0666 | Hypothetical protein. | VirK protein. | 0.486 |
Lisr_0663 | Lisr_0660 | Coiled-coil protein. | Bacteriophage-like DNA polymerase. | 0.441 |
Lisr_0663 | Lisr_0661 | Coiled-coil protein. | Acetyltransferase (GNAT) family protein. | 0.651 |
Lisr_0663 | Lisr_0662 | Coiled-coil protein. | Hypothetical protein. | 0.773 |
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