STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pilE_1type-IV pilin. (143 aa)    
Predicted Functional Partners:
PilV
Pre-pilin leader sequence (pilV).
 
  
 0.922
Lisr_1116
Tfp pilus assembly protein PilW.
 
  
 0.915
Lisr_1118
Type IV fimbrial biogenesis PilY1-like protein.
 
  
 0.909
Lisr_1117
Tfp pilus assembly protein PilX.
 
  
 0.904
Lisr_1648
Type IV pre-pilin.
 
  
 0.859
pilN
Tfp pilus assembly protein PilN.
 
  
 0.803
pilM
Tfp pilus assembly protein, ATPase PilM.
 
   
 0.799
Lisr_1403
Type IV pilus biogenesis protein PilO.
 
   
 0.780
Lisr_0430
LysM domain-containing protein.
  
     0.708
Lisr_1278
Hypothetical protein.
  
  
 0.637
Your Current Organism:
Legionella israelensis
NCBI taxonomy Id: 454
Other names: ATCC 43119, CCUG 31115, CIP 103879, DSM 19235, JCM 7560, L. israelensis, NCTC 12010, strain Bercovier 4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.