Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Lisr_1393 | aguA | Lisr_1393 | Lisr_1391 | Putative hydrolase. | Peptidylarginine deiminase. | 0.999 |
Lisr_1393 | speA | Lisr_1393 | Lisr_1392 | Putative hydrolase. | Arginine decarboxylase; Catalyzes the biosynthesis of agmatine from arginine. Belongs to the Orn/Lys/Arg decarboxylase class-II family. SpeA subfamily. | 0.828 |
aguA | Lisr_1393 | Lisr_1391 | Lisr_1393 | Peptidylarginine deiminase. | Putative hydrolase. | 0.999 |
aguA | lysAC | Lisr_1391 | Lisr_2171 | Peptidylarginine deiminase. | Bifunctional aspartate kinase/diaminopimelate decarboxylase protein; Belongs to the Orn/Lys/Arg decarboxylase class-II family. | 0.428 |
aguA | speA | Lisr_1391 | Lisr_1392 | Peptidylarginine deiminase. | Arginine decarboxylase; Catalyzes the biosynthesis of agmatine from arginine. Belongs to the Orn/Lys/Arg decarboxylase class-II family. SpeA subfamily. | 0.986 |
argH | astA | Lisr_2628 | Lisr_1079 | Argininosuccinate lyase. | Arginine N-succinyltransferase, beta chain. | 0.809 |
argH | lysAC | Lisr_2628 | Lisr_2171 | Argininosuccinate lyase. | Bifunctional aspartate kinase/diaminopimelate decarboxylase protein; Belongs to the Orn/Lys/Arg decarboxylase class-II family. | 0.493 |
argH | speA | Lisr_2628 | Lisr_1392 | Argininosuccinate lyase. | Arginine decarboxylase; Catalyzes the biosynthesis of agmatine from arginine. Belongs to the Orn/Lys/Arg decarboxylase class-II family. SpeA subfamily. | 0.831 |
astA | argH | Lisr_1079 | Lisr_2628 | Arginine N-succinyltransferase, beta chain. | Argininosuccinate lyase. | 0.809 |
astA | speA | Lisr_1079 | Lisr_1392 | Arginine N-succinyltransferase, beta chain. | Arginine decarboxylase; Catalyzes the biosynthesis of agmatine from arginine. Belongs to the Orn/Lys/Arg decarboxylase class-II family. SpeA subfamily. | 0.900 |
hutG | lysAC | Lisr_0926 | Lisr_2171 | Formiminoglutamase; Catalyzes the conversion of N-formimidoyl-L-glutamate to L- glutamate and formamide; Belongs to the arginase family. | Bifunctional aspartate kinase/diaminopimelate decarboxylase protein; Belongs to the Orn/Lys/Arg decarboxylase class-II family. | 0.473 |
hutG | speA | Lisr_0926 | Lisr_1392 | Formiminoglutamase; Catalyzes the conversion of N-formimidoyl-L-glutamate to L- glutamate and formamide; Belongs to the arginase family. | Arginine decarboxylase; Catalyzes the biosynthesis of agmatine from arginine. Belongs to the Orn/Lys/Arg decarboxylase class-II family. SpeA subfamily. | 0.429 |
lysAC | aguA | Lisr_2171 | Lisr_1391 | Bifunctional aspartate kinase/diaminopimelate decarboxylase protein; Belongs to the Orn/Lys/Arg decarboxylase class-II family. | Peptidylarginine deiminase. | 0.428 |
lysAC | argH | Lisr_2171 | Lisr_2628 | Bifunctional aspartate kinase/diaminopimelate decarboxylase protein; Belongs to the Orn/Lys/Arg decarboxylase class-II family. | Argininosuccinate lyase. | 0.493 |
lysAC | hutG | Lisr_2171 | Lisr_0926 | Bifunctional aspartate kinase/diaminopimelate decarboxylase protein; Belongs to the Orn/Lys/Arg decarboxylase class-II family. | Formiminoglutamase; Catalyzes the conversion of N-formimidoyl-L-glutamate to L- glutamate and formamide; Belongs to the arginase family. | 0.473 |
lysAC | speA | Lisr_2171 | Lisr_1392 | Bifunctional aspartate kinase/diaminopimelate decarboxylase protein; Belongs to the Orn/Lys/Arg decarboxylase class-II family. | Arginine decarboxylase; Catalyzes the biosynthesis of agmatine from arginine. Belongs to the Orn/Lys/Arg decarboxylase class-II family. SpeA subfamily. | 0.488 |
speA | Lisr_1393 | Lisr_1392 | Lisr_1393 | Arginine decarboxylase; Catalyzes the biosynthesis of agmatine from arginine. Belongs to the Orn/Lys/Arg decarboxylase class-II family. SpeA subfamily. | Putative hydrolase. | 0.828 |
speA | aguA | Lisr_1392 | Lisr_1391 | Arginine decarboxylase; Catalyzes the biosynthesis of agmatine from arginine. Belongs to the Orn/Lys/Arg decarboxylase class-II family. SpeA subfamily. | Peptidylarginine deiminase. | 0.986 |
speA | argH | Lisr_1392 | Lisr_2628 | Arginine decarboxylase; Catalyzes the biosynthesis of agmatine from arginine. Belongs to the Orn/Lys/Arg decarboxylase class-II family. SpeA subfamily. | Argininosuccinate lyase. | 0.831 |
speA | astA | Lisr_1392 | Lisr_1079 | Arginine decarboxylase; Catalyzes the biosynthesis of agmatine from arginine. Belongs to the Orn/Lys/Arg decarboxylase class-II family. SpeA subfamily. | Arginine N-succinyltransferase, beta chain. | 0.900 |
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