STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lspJType II secretory pathway protein LspJ. (208 aa)    
Predicted Functional Partners:
lspI
Type II secretory pathway protein LspI.
 
 
 0.997
lspK
Type II secretory pathway protein.
 
 
 0.996
GspH
General secretion pathway protein LspH.
 
 
 0.989
lspG
Type II secretory pathway protein LspG.
 
 
 0.971
GspG
Hypothetical protein.
 
 
 0.930
lspD
Type II protein secretion LspD.
 
  
 0.877
Lisr_1157
General secretion pathway protein C.
 
  
 0.822
lspF
Type II secretory pathway protein LspF.
 
  
 0.816
Lisr_0820
General secretion pathway protein.
 
  
 0.815
Lisr_0819
General secretion pathway protein L; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins.
 
   
 0.799
Your Current Organism:
Legionella israelensis
NCBI taxonomy Id: 454
Other names: ATCC 43119, CCUG 31115, CIP 103879, DSM 19235, JCM 7560, L. israelensis, NCTC 12010, strain Bercovier 4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.