STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GspHGeneral secretion pathway protein LspH. (154 aa)    
Predicted Functional Partners:
lspJ
Type II secretory pathway protein LspJ.
 
 
 0.989
lspK
Type II secretory pathway protein.
 
 
 0.984
lspI
Type II secretory pathway protein LspI.
 
   
 0.958
lspF
Type II secretory pathway protein LspF.
 
  
 0.847
Lisr_1157
General secretion pathway protein C.
 
  
 0.814
Lisr_0819
General secretion pathway protein L; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins.
 
  
 0.793
Lisr_0820
General secretion pathway protein.
 
  
 0.786
lspG
Type II secretory pathway protein LspG.
 
   
 0.772
lspD
Type II protein secretion LspD.
 
  
 0.755
lspE
Type II protein secretion ATPase LspE; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins.
  
 
 0.688
Your Current Organism:
Legionella israelensis
NCBI taxonomy Id: 454
Other names: ATCC 43119, CCUG 31115, CIP 103879, DSM 19235, JCM 7560, L. israelensis, NCTC 12010, strain Bercovier 4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.