STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lisr_2008Hypothetical protein. (181 aa)    
Predicted Functional Partners:
glnA
Glutamine synthetase.
       0.761
Lisr_2009
Hypothetical protein.
       0.709
pilF
Fimbrial biogenesis and twitching motility protein PilF.
  
     0.567
mutH
DNA mismatch repair protein; Sequence-specific endonuclease that cleaves unmethylated GATC sequences. It is involved in DNA mismatch repair. Belongs to the MutH family.
  
     0.562
lspF
Type II secretory pathway protein LspF.
       0.562
lspG
Type II secretory pathway protein LspG.
       0.534
Lisr_1560
Hypothetical protein.
  
     0.496
pilN
Tfp pilus assembly protein PilN.
  
     0.485
Lisr_0430
LysM domain-containing protein.
  
    0.474
Lisr_1403
Type IV pilus biogenesis protein PilO.
  
     0.471
Your Current Organism:
Legionella israelensis
NCBI taxonomy Id: 454
Other names: ATCC 43119, CCUG 31115, CIP 103879, DSM 19235, JCM 7560, L. israelensis, NCTC 12010, strain Bercovier 4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.