Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Lisr_0361 | Lisr_2253 | Lisr_0361 | Lisr_2253 | Cyanophycinase; Belongs to the peptidase S51 family. | UDP-N-acetylmuramyl tripeptide synthase. | 0.796 |
Lisr_0361 | cphA | Lisr_0361 | Lisr_0360 | Cyanophycinase; Belongs to the peptidase S51 family. | Cyanophycin synthetase. | 0.965 |
Lisr_1623 | Lisr_2253 | Lisr_1623 | Lisr_2253 | Regulatory protein (GGDEF domain). | UDP-N-acetylmuramyl tripeptide synthase. | 0.411 |
Lisr_1623 | cphA | Lisr_1623 | Lisr_0360 | Regulatory protein (GGDEF domain). | Cyanophycin synthetase. | 0.440 |
Lisr_1623 | polA | Lisr_1623 | Lisr_1500 | Regulatory protein (GGDEF domain). | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.519 |
Lisr_2252 | Lisr_2253 | Lisr_2252 | Lisr_2253 | Mechanosensitive ion channel MscS. | UDP-N-acetylmuramyl tripeptide synthase. | 0.523 |
Lisr_2253 | Lisr_0361 | Lisr_2253 | Lisr_0361 | UDP-N-acetylmuramyl tripeptide synthase. | Cyanophycinase; Belongs to the peptidase S51 family. | 0.796 |
Lisr_2253 | Lisr_1623 | Lisr_2253 | Lisr_1623 | UDP-N-acetylmuramyl tripeptide synthase. | Regulatory protein (GGDEF domain). | 0.411 |
Lisr_2253 | Lisr_2252 | Lisr_2253 | Lisr_2252 | UDP-N-acetylmuramyl tripeptide synthase. | Mechanosensitive ion channel MscS. | 0.523 |
Lisr_2253 | cphA | Lisr_2253 | Lisr_0360 | UDP-N-acetylmuramyl tripeptide synthase. | Cyanophycin synthetase. | 0.478 |
Lisr_2253 | ftsA | Lisr_2253 | Lisr_0082 | UDP-N-acetylmuramyl tripeptide synthase. | Cell division protein FtsA; Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring. Belongs to the FtsA/MreB family. | 0.584 |
Lisr_2253 | ftsQ | Lisr_2253 | Lisr_0081 | UDP-N-acetylmuramyl tripeptide synthase. | Cell division protein FtsQ; Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly. | 0.603 |
Lisr_2253 | murD | Lisr_2253 | Lisr_0076 | UDP-N-acetylmuramyl tripeptide synthase. | UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF family. | 0.463 |
Lisr_2253 | murG | Lisr_2253 | Lisr_1321 | UDP-N-acetylmuramyl tripeptide synthase. | Undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II); Belongs to the glycosyltransferase 28 family. MurG subfamily. | 0.527 |
Lisr_2253 | polA | Lisr_2253 | Lisr_1500 | UDP-N-acetylmuramyl tripeptide synthase. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.408 |
cphA | Lisr_0361 | Lisr_0360 | Lisr_0361 | Cyanophycin synthetase. | Cyanophycinase; Belongs to the peptidase S51 family. | 0.965 |
cphA | Lisr_1623 | Lisr_0360 | Lisr_1623 | Cyanophycin synthetase. | Regulatory protein (GGDEF domain). | 0.440 |
cphA | Lisr_2253 | Lisr_0360 | Lisr_2253 | Cyanophycin synthetase. | UDP-N-acetylmuramyl tripeptide synthase. | 0.478 |
cphA | ftsA | Lisr_0360 | Lisr_0082 | Cyanophycin synthetase. | Cell division protein FtsA; Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring. Belongs to the FtsA/MreB family. | 0.977 |
cphA | ftsQ | Lisr_0360 | Lisr_0081 | Cyanophycin synthetase. | Cell division protein FtsQ; Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly. | 0.942 |
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