STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LtrA-2Reverse transcriptase. (413 aa)    
Predicted Functional Partners:
Lisr_2607
Integrase; Belongs to the 'phage' integrase family.
  
    0.527
Lisr_2608
Hypothetical protein.
       0.485
Lisr_1249
Type III restriction enzyme, res subunit.
 
     0.467
Lisr_0579
Transposase zinc-ribbon domain protein.
  
     0.417
Lisr_1541
Transposase IS66 family protein.
  
     0.410
Lisr_1542
Transposase.
  
     0.407
Your Current Organism:
Legionella israelensis
NCBI taxonomy Id: 454
Other names: ATCC 43119, CCUG 31115, CIP 103879, DSM 19235, JCM 7560, L. israelensis, NCTC 12010, strain Bercovier 4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.