STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A3L6PBY3ABC transporter domain-containing protein. (725 aa)    
Predicted Functional Partners:
A0A3L6R6J6
E3 ubiquitin-protein ligase UPL4.
     
 0.858
A0A3L6REQ0
HECT domain-containing protein.
     
 0.858
A0A3L6SZV3
E3 ubiquitin-protein ligase UPL4.
     
 0.858
A0A3L6T4W0
HECT domain-containing protein.
     
 0.858
A0A3L6TE74
Uncharacterized protein.
  
 
 0.692
A0A3L6PPJ5
Cytochrome c oxidase assembly protein COX15.
    
 0.639
A0A3L6RBL7
Uncharacterized protein.
    
 0.639
A0A3L6RCF0
Cytochrome c oxidase assembly protein COX15.
    
 0.639
A0A3L6RI29
Cytochrome c oxidase assembly protein COX15.
    
 0.639
A0A3L6SXM9
Cytochrome c oxidase assembly protein COX15 isoform X2.
    
 0.639
Your Current Organism:
Panicum miliaceum
NCBI taxonomy Id: 4540
Other names: P. miliaceum, Panicum miliaceum L., broom millet, common millet, proso millet
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.