STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A3L6PBY7Transcription initiation factor TFIID subunit 5. (636 aa)    
Predicted Functional Partners:
A0A3L6R539
Uncharacterized protein.
    
 0.991
A0A3L6QQ74
Putative TATA binding protein family protein.
   
 0.981
A0A3L6SRH2
Transcription initiation factor TFIID subunit 6.
   
 0.981
A0A3L6PBB2
Peptidase_M1 domain-containing protein.
    
 0.980
A0A3L6QVH6
Transcription initiation factor TFIID subunit 10.
    
 0.980
A0A3L6R0G0
Transcription initiation factor TFIID subunit 7.
    
 0.980
A0A3L6R1K1
Transcription initiation factor TFIID subunit 11.
    
 0.980
A0A3L6SM08
Transcription initiation factor TFIID subunit 7.
    
 0.980
A0A3L6SP05
Transcription initiation factor TFIID subunit 11.
    
 0.980
A0A3L6T6B0
Transcription initiation factor TFIID subunit 2.
    
 0.980
Your Current Organism:
Panicum miliaceum
NCBI taxonomy Id: 4540
Other names: P. miliaceum, Panicum miliaceum L., broom millet, common millet, proso millet
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