STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A3L6Q197LRRNT_2 domain-containing protein. (931 aa)    
Predicted Functional Partners:
A0A3L6QH85
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
    
 0.650
A0A3L6TEL4
Small nuclear ribonucleoprotein-associated protein.
    
 0.645
A0A3L6RUE1
Elongation factor 1-gamma 2.
    
  0.618
A0A3L6Q1Q9
PHD finger-like domain-containing protein 5B isoform X1.
    
  0.589
A0A3L6T5B4
Uncharacterized protein.
    
  0.589
A0A3L6RJT3
Sm domain-containing protein.
    
  0.569
A0A3L6SLE4
Small nuclear ribonucleoprotein F, putative, expressed.
    
  0.569
A0A3L6R939
E3 ubiquitin-protein ligase KEG.
    
  0.534
A0A3L6T0U7
E3 ubiquitin-protein ligase KEG.
    
  0.534
A0A3L6PPT4
Small nuclear ribonucleoprotein Sm D2.
    
 0.530
Your Current Organism:
Panicum miliaceum
NCBI taxonomy Id: 4540
Other names: P. miliaceum, Panicum miliaceum L., broom millet, common millet, proso millet
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.