STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A3L6QC92E3 ubiquitin-protein ligase UPL3-like. (1848 aa)    
Predicted Functional Partners:
A0A3L6R2E8
E3 ubiquitin-protein ligase; Ubiquitin ligase protein which is a component of the N-end rule pathway. Recognizes and binds to proteins bearing specific N- terminal residues that are destabilizing according to the N-end rule, leading to their ubiquitination and subsequent degradation.
   
 0.999
A0A3L6R6J6
E3 ubiquitin-protein ligase UPL4.
  
  
 
0.999
A0A3L6REQ0
HECT domain-containing protein.
  
  
 
0.999
A0A3L6SAW3
WAPL domain-containing protein.
   
    0.999
A0A3L6SLK0
E3 ubiquitin-protein ligase; Ubiquitin ligase protein which is a component of the N-end rule pathway. Recognizes and binds to proteins bearing specific N- terminal residues that are destabilizing according to the N-end rule, leading to their ubiquitination and subsequent degradation.
   
 0.999
A0A3L6SZV3
E3 ubiquitin-protein ligase UPL4.
  
  
 
0.999
A0A3L6T4W0
HECT domain-containing protein.
  
  
 
0.999
A0A3L6THW9
WAPL domain-containing protein.
   
    0.999
A0A3L6SC62
Putative ubiquitin conjugation factor E4.
   
 0.974
A0A3L6TJU9
Putative ubiquitin conjugation factor E4.
   
 0.974
Your Current Organism:
Panicum miliaceum
NCBI taxonomy Id: 4540
Other names: P. miliaceum, Panicum miliaceum L., broom millet, common millet, proso millet
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