STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A3L6QI22Rep_fac-A_C domain-containing protein. (592 aa)    
Predicted Functional Partners:
A0A3L6PXR8
PlsC domain-containing protein.
    
  0.597
A0A3L6SF95
PlsC domain-containing protein.
    
  0.597
A0A3L6TU52
1-acyl-sn-glycerol-3-phosphate acyltransferase 1, chloroplastic.
    
  0.597
A0A3L6RNC6
Putative 3-deoxy-D-manno-octulosonic acid transferase, mitochondrial.
    
  0.592
A0A3L6SJF5
Putative 3-deoxy-D-manno-octulosonic acid transferase, mitochondrial.
    
  0.592
A0A3L6QK35
Protein phosphatase 2C and cyclic nucleotide-binding/kinase domain-containing protein.
    
 0.581
A0A3L6RQ72
Protein phosphatase 2C and cyclic nucleotide-binding/kinase domain-containing protein.
    
 0.581
A0A3L6R939
E3 ubiquitin-protein ligase KEG.
    
  0.491
A0A3L6T0U7
E3 ubiquitin-protein ligase KEG.
    
  0.491
A0A3L6RVU4
Uncharacterized protein.
    
  0.481
Your Current Organism:
Panicum miliaceum
NCBI taxonomy Id: 4540
Other names: P. miliaceum, Panicum miliaceum L., broom millet, common millet, proso millet
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